BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021D09SP1|AL427761
(1013 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig970 1968 0.0
>3x_Contig970
Length = 3320
Score = 1968 bits (990), Expect = 0.0
Identities = 1008/1014 (99%), Gaps = 2/1014 (0%)
Strand = Plus / Plus
Query: 1 atcgtttctagatttcttgctacctgagaacagttcccaatctaacagcgctatgtcaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 atcgtttctagatttcttgctacctgagaacagttcccaatctaacagcgctatgtcaat 344
Query: 61 ctgacattccaactcagtacgtctcttaagatcatctaaagcaattgtgttggatttaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ctgacattccaactcagtacgtctcttaagatcatctaaagcaattgtgttggatttaag 404
Query: 121 cagtctccgtctacactctgactggttttcttggatgtwatcttttaatcgaggcaagat 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 405 cagtctccgtctacactctgactggttttcttggatgttatcttttaatcgaggcaagat 464
Query: 181 gtccttttgatcagtggccacatatttatcaacgtaattagagaaaacaataggaaacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 gtccttttgatcagtggccacatatttatcaacgtaattagagaaaacaataggaaacat 524
Query: 241 tggtgatgttccagtgcccagttcaaggacatatcgtagtttatcatcttgctgacattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 tggtgatgttccagtgcccagttcaaggacatatcgtagtttatcatcttgctgacattg 584
Query: 301 aaaaatggatgtaatatctacctcatcctttacaccccctcttgtgaatatggtagcgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 aaaaatggatgtaatatctacctcatcctttacaccccctcttgtgaatatggtagcgtt 644
Query: 361 gtcattgtataataaccatttgagaataaaagtagacgtggtccaaatgacgtatccagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 gtcattgtataataaccatttgagaataaaagtagacgtggtccaaatgacgtatccagt 704
Query: 421 cgtcgagttattattatsacggttggaatttaaagaggttaggttttggtgtatactaaa 480
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 cgtcgagttattattatcacggttggaatttaaagaggttaggttttggtgtatactaaa 764
Query: 481 tgtatactcatctctttctggtgctttttttttcctggtcactaggcgatgtggcccaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 tgtatactcatctctttctggtgctttttttttcctggtcactaggcgatgtggcccaat 824
Query: 541 gtctatctctaattctgattcgtttctcgacagaataccgagatcttgagataaatcgtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 gtctatctctaattctgattcgtttctcgacagaataccgagatcttgagataaatcgtt 884
Query: 601 tgcgttag-ctctaattccacatatcgttcgaaaatgtactcatataaagtctcttcatc 659
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 tgcgttagcctctaattccacatatcgttcgaaaatgtactcatataaagtctcttcatc 944
Query: 660 gagcagtactaattccatgataaacagatcgtcatcttagtaagctctgcgctgaaatgg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 945 gagcagtactaattccatgataaacagatcgtcatcttagtaagctctgcgctgaaatgg 1004
Query: 720 attagtgcccattgtaggtattctgtaacgaaatatgaattatgaattacattttatctg 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1005 attagtgcccattgtaggtattctgtaacgaaatatgaattatgaattacattttatctg 1064
Query: 780 gttatacatgattacgtgaaagaracaaaaatattcggagcactagaaactgcctttcaa 839
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1065 gttatacatgattacgtgaaagaaacaaaaatattcggagcactagaaactgcctttcaa 1124
Query: 840 atttgcttcaggaagaattatcattttgcgtttagatgatgttcttggctaatagaattt 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1125 atttgcttcaggaagaattatcattttgcgtttagatgatgttcttggctaatagaattt 1184
Query: 900 cggcaatcaagatacctgcacctgcagcaccgataacggtgttgtggggacaatacaacc 959
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1185 cggcaatcaagatacctgcacctgcagcaccgataacggtgttgt-gggacaatacaacc 1243
Query: 960 attttgaagtccaatacaggatcttctctgactctaccaamagatacaccgtaa 1013
|||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1244 attttgaagtccaatacaggatcttctctgactctaccaacagatacaccgtaa 1297
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7103
Number of Sequences: 1807
Number of extensions: 7103
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 1013
length of database: 10,358,551
effective HSP length: 16
effective length of query: 997
effective length of database: 10,329,639
effective search space: 10298650083
effective search space used: 10298650083
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)